CONTENTS Molecular Modeling Bioinformatics Molecular Graphics Journals Unix/Linux Science General Other Cool Links Kunu's 2002 (^^) Bookmark
Molecular Dynamics (MD) Simulations AMBER CCMSD CHARMM Discover GROMACS GROMOS NAMD NWChem HyperChem MacroModel UHBD Molecular Docking Simulations Autodock DOCK DOT FlexX FTDock Glide GOLD Protein Structure Visualization ACD AVS Grasp Grasp2 gOpenMol Hex InsightII Maestro Molden MolMol Molscript MoluCAD PyMOL Rasmol VMD XMol Quantum Mechanics Calculations GAMESS Gaussian Jaguar HyperChem Molcas NWChem Molpro PCModel Spartan Computer-Aided Drug Design (CADD) Catalyst & Cerius2 & InsightII MOE QikPro SYBYL More BOSS (Monte Calro Simulation) Delphi (ESP Calculation) MATLAB (Analysis & Visualization) NAB(Nucleic Acid Builder) Prime (Structure Prediction) QCPE UHBD (ESP/pKa Calculations)
Molecular Dynamics (MD) Simulations AMBER CCMSD CHARMM Discover GROMACS GROMOS NAMD NWChem HyperChem MacroModel UHBD
Molecular Docking Simulations Autodock DOCK DOT FlexX FTDock Glide GOLD
Protein Structure Visualization ACD AVS Grasp Grasp2 gOpenMol Hex InsightII Maestro Molden MolMol Molscript MoluCAD PyMOL Rasmol VMD XMol
Quantum Mechanics Calculations GAMESS Gaussian Jaguar HyperChem Molcas NWChem Molpro PCModel Spartan
Computer-Aided Drug Design (CADD) Catalyst & Cerius2 & InsightII MOE QikPro SYBYL
More BOSS (Monte Calro Simulation) Delphi (ESP Calculation) MATLAB (Analysis & Visualization) NAB(Nucleic Acid Builder) Prime (Structure Prediction) QCPE UHBD (ESP/pKa Calculations)
Key Centers/Sites NCBI (National Center for Biotechnology Information) EBI (European Bioinformatics Institute) ExPASy(Expert Protein Analysis System) National Human Genome Research Institute Human Genome Project Information (ORNL) TIGR (The Institute for Genomic Research) Sanger Institute UCGC Genome Bioinformatics DDBJ (DNA Data Bank of Japan) PRF (Protein Research Foundation, Japan) PIR (Protein Information Resource) SIB (Swiss Institute of Bioinformatics) UniProt (Universial Protein Databases) (= PIR + SIB + EBI ) CCBB in KISTI (Korea) NGIC in KRIBB (Korea) GeneNuri in BRIC/POSTECH (Korea) Open Bioinformatics Foundation Bioinformatics.Org R BioConductor Genome DB Servers GenBank-NCBI (USA, Genome DB) EMBL-EBI (EU, Genome DB) DDBJ (Japan, Genome DB) PDB (USA, 3D Structure DB, USA) CCBB in KISTI (Korea) NGIC in KRIBB (Korea) GeneNuri in BRIC/POSTECH (Korea)
Key Centers/Sites NCBI (National Center for Biotechnology Information) EBI (European Bioinformatics Institute) ExPASy(Expert Protein Analysis System) National Human Genome Research Institute Human Genome Project Information (ORNL) TIGR (The Institute for Genomic Research) Sanger Institute UCGC Genome Bioinformatics DDBJ (DNA Data Bank of Japan) PRF (Protein Research Foundation, Japan) PIR (Protein Information Resource) SIB (Swiss Institute of Bioinformatics) UniProt (Universial Protein Databases) (= PIR + SIB + EBI ) CCBB in KISTI (Korea) NGIC in KRIBB (Korea) GeneNuri in BRIC/POSTECH (Korea) Open Bioinformatics Foundation Bioinformatics.Org R BioConductor
Genome DB Servers GenBank-NCBI (USA, Genome DB) EMBL-EBI (EU, Genome DB) DDBJ (Japan, Genome DB) PDB (USA, 3D Structure DB, USA) CCBB in KISTI (Korea) NGIC in KRIBB (Korea) GeneNuri in BRIC/POSTECH (Korea)
Adobe Computer Graphics GIMP GLUT ImageMagick JPEG JPEG Archive MacKichan OpenGL PNG PNG Archive PovRay Raster3D Rayshade Xv ZLIB ZLIB Archive
Biochemical Journal Biochemistry Bioinformatics Biophysical Journal Biopolymers Cell EMBO Journal FASEB Journal FEBS Letters J. of the American Chemical Society (JACS) J. of Biological Chemistry (JBC) J. of Cell Biology (JCB) J. of Chemical Physics (JCP) J. of Computer-Aided Molecular Design J. of Computational Biology J. of Computational Chemistry (JCC) J. of Computational Physics J. of Medicinal Chemistry (JMC) J. of Molecular Biology (JMB) J. of Molecular Modeling J. of Physical Chemistry A (JPC-A) J. of Physical Chemistry B (JPC-B) Nature Nature Medicine Nature Structural & Molecular Biology PNAS Protein Engineering Protein Science Proteins: Structure, Function, and Bioinformatics Science
e-Journals (in GSNU) ACS Journals Web of Science
Unix Unix & Linux (& Their Commands) Linux Linux Commands RedHat Linux Linux Documentation Project Linux Documentation Project(KOREAN) Linux RPM Finder Red Hat Linux Mirror Sites Network Howto (KOREAN) Beowulf Cluster Security Documents Security Sites Security Sites (KOREAN) Hackers Lab Hackers Lab (JeonJoo,JCC)
Fundamental Physical Constants Conversion of Units Useful Periodic Table of the Elements Ooura's Mathematical Functions Monte Carlo Simulation
BBCU - Bioinformatics & Biological Computing, WIS BDGP - Berkeley Drosophila Genome Project
