[ 대학원종합시험문제집]
[ Graduation Qualification Exam for Graduate Students ]

"Study about the following terms!" -Prof. Lee-

Molecular Dynamics Simulation Programs

• AMBER
• CHARMM
• GROMACS
• NAMD
• Discover

Molecular Docking Simulation Programs

• Autodock
• DOCK
• Glide
• GOLD
• DOT

UNIX & LINUX

• Unix
• Linux

Key Centers/Sites

• NCBI (National Center for Biotechnology Information)
• EBI (European Bioinformatics Institute)
• TIGR (The Institute for Genomic Research)
• UCGC Genome Bioinformatics
• DDBJ (DNA Data Bank of Japan)

Genome DB Servers

• GenBank-NCBI (USA, Genome DB)
• EMBL-EBI (EU, Genome DB)
• DDBJ (Japan, Genome DB)
• PDB from RCSB (USA, 3D Structure DB, USA)

Key Terms/Methods

• FASTA
• BLAST
• PAM & BLOSUM
• EST/STS/GSS